Hanbo Chen

Dr. Hanbo Chen

Ph.D Student, System Manager

Currently Research Scientist at CuraCloud Corporation

Research Interests: Medical Image Analysis, Network Analysis, Brain Development and Evolution.

Email: cojoc(at)uga(dot)edu

Web: http://cs.uga.edu/~hanbo/


Publications

1. Mechanisms of Gyral Convolution in Circumferential Direction of Primate Brains Tuo Zhang1,2*, Mir Jalil Razavi3*, Hanbo Chen2, Yujie Li2, Xiao Li1, Longchuan Li4, Lei Guo1, Xiaoping Hu4, Tianming Liu2**, Xianqiao Wang3** Journal of Computational Neuroscience, 2017. in press, *These authors contributed equally to this work **Joint correspondence authors PDF
2. Mechanism of Consistent Gyrus Formation: an Experimental and Computational Study Tuo Zhang*, Mir Jalil Razavi*, Xiao Li, Hanbo Chen, Tianming Liu**, Xianqiao Wang** Scientific Reports, 2016. in press, *These authors contributed equally to this work **Joint correspondence authors PDF
3. Commonly-Preserved and Species-Specific Gyral Folding Patterns across Primate Brains Xiao Li*, Hanbo Chen*, Tuo Zhang*, Xiang Yu, Xi Jiang, Kaiming Li, Longchuan Li, Mir Jalil Razavi, Xianqiao Wang, Xintao Hu, Junwei Han, Lei Guo, Xiaoping Hu**, Tianming Liu** Brain Structure and Function, 2016. in press,*Co-first authors; **Joint corresponding authors PDF
4. Discover Mouse Gene Coexpression Landscape Using Dictionary Learning and Sparse Coding Yujie Li*, Hanbo Chen*, Xi Jiang, Xiang Li, Jinglei Lv, Hanchuan Peng**, Joe Z. Tsien**, Tianming Liu** MICCAI, 2016. vol. 9900, pp. 63-71. *Co-first Authors, **Joint Corresponding Authors PDF
5. Group-wise Sparse Representation of Brain States Reveal Network Abnormalities in Mild Traumatic Brain Injury Jinglei Lv*, Armin Iraji*, Hanbo Chen, Fangfei Ge, Lei Guo, Xin Zhang, Zhifeng Kou**, Tianming Liu** ISBI, 2016. *Co-first authors; **Joint corresponding authors PDF
6. Connectome-scale Group-wise Consistent Resting-state Network Analysis in Autism Spectrum Disorder Yu Zhao*, Hanbo Chen*, Yujie Li, Jinglei Lv, Xi Jiang, Fangfei Ge, Tuo Zhang, Shu Zhang, Bao Ge, Cheng Lyu, Shijie Zhao, Junwei Han, Lei Guo, Tianming Liu NeuroImage: Clinical, 2016. in press. *These authors contributed equally to this work. PDF
7. Connectome-scale Assessment of Structural and Functional Connectivity in Mild Traumatic Brain Injury at the Acute Stage Armin Iraji*, Hanbo Chen*, Natalie Wiseman, Tuo Zhang, Robert Welch, Brian O'Neil, Andrew Kulek, Syed Imran Ayaz, Xiao Wang, Conor Zuk, E Mark Haacke, Tianming Liu**, Zhifeng Kou** NeuroImage: Clinical, 2016. in press. *Co-first authors; **Joint corresponding authors. PDF
8. Multi-scale and Multimodal Fusion of Tract-tracing, Myelin Stain and DTI-derived Fibers in Macaque Brains Tuo Zhang, Jun Kong, Ke Jing, Hanbo Chen, Xi Jiang, Longchuan Li, Lei Guo, Jianfeng Lu, Xiaoping Hu, Tianming Liu MICCAI, LNCS, 2015. vol. 9350, pp. 246-254. PDF
9. Distance Networks for Morphological Profiling and Characterization of DICCCOL Landmarks Yue Yuan*, Hanbo Chen*, Jianfeng Lu, Tuo Zhang, Tianming Liu MICCAI, LNCS, 2015. vol. 9350, pp. 380-387. *Co-first authors PDF
10. Longitudinal Analysis of Brain Recovery After Mild Traumatic Brain Injury Based on Groupwise Consistent Brain Network Clusters Hanbo Chen*, Armin Iraji*, Xi Jiang, Jinglei Lv, Zhifeng Kou**, Tianming Liu** MICCAI, LNCS, 2015. vol. 9350, pp. 194-201. *Co-first authors; **Joint corresponding authors. PDF
11. Compensation through Functional Hyperconnectivity: A Longitudinal Connectome Assessment of Mild Traumatic Brain Injury Armin Iraji, Hanbo Chen, Natalie Wiseman, E. Mark Haacke, Tianming Liu, Zhifeng Kou Neural Plasticity, 2015. in press PDF
12. Optimization of Large-scale Mouse Brain Connectome via Joint Evaluation of DTI and Neuron Tracing Data Hanbo Chen, Tao Liu, Yu Zhao, Tuo Zhang, Yujie Li, Meng Li, Hongmiao Zhang, Hui Kuang, Lei Guo, Joe Tsien, Tianming Liu NeuroImage, 2015. vol. 115, pp. 202 - 213. PDF
13. SmartTracing: Self-learning based Neuron Reconstruction Hanbo Chen, Hang Xiao, Tianming Liu, Hanchuan Peng Brain Informatics, 2015. vol. 2(3), pp. 135-144. PDF
14. Multiscale and multimodal fusion of tract-tracing and DTI-derived fibers in macaque brains Ke Jing, Tuo Zhang, Jianfeng Lu, Hanbo Chen, Lei Guo, Longchuan Li, Xiaoping Hu, Tianming Liu ISBI, 2015. pp. 938-942. PDF
15. Group-wise consistent sulcal fundi segmentation on dMRI-derived ODF features Tuo Zhang, Hanbo Chen, Xi Jiang, Lei Guo, Tianming Liu ISBI, 2015. pp. 638-641. PDF
16. Holistic Atlases of Functional Networks and Interactions Reveal Reciprocal Organizational Architecture of Cortical Function Jinglei Lv*, Xi Jiang*, Xiang Li*, Dajiang Zhu*, Shu Zhang, Shijie Zhao, Hanbo Chen, Tuo Zhang, Xintao Hu, Junwei Han, Jieping Ye, Lei Guo, Tianming Liu IEEE Transactions on Biomedical Engineering, 2015. vol. 62(4), pp. 1120-1131. *These authors contributed equally to this work PDF
17. Anatomy-guided Dense Individualized and Common Connectivity-based Cortical Landmarks (A-DICCCOL) Xi Jiang, Tuo Zhang, Dajiang Zhu, Kaiming Li, Hanbo Chen, Jinglei Lv, Xintao Hu, Junwei Han, Dinggang Shen, Lei Guo, Tianming Liu IEEE Transactions on Biomedical Engineering, 2015. vol. 62(4), pp. 1108 - 1119. PDF
18. Sparse Representation of Whole-brain FMRI Signals for Identification of Functional Networks Jinglei Lv*, Xi Jiang*, Xiang Li*, Dajiang Zhu, Hanbo Chen, Tuo Zhang, Shu Zhang, Xintao Hu, Junwei Han, Heng Huang, Jing Zhang, Lei Guo, Tianming Liu Medical Image Analysis, 2015. vol. 20(1), pp. 112–134. *These authors contributed equally to this work PDF
19. Allen Mouse Brain Atlases Reveal Different Neural Connection and Gene Expression Patterns in Cerebellum Gyri and Sulci Tao Zeng, Hanbo Chen, Ahmed Fakhry, Xiaoping Hu, Tianming Liu*, Shuiwang Ji* Brain Structure and Function, 2015. vol. 220(5), pp. 2691-703. *Joint-correspondence authors PDF
20. Construct and Assess Multimodal Mouse Brain Connectomes via Joint Modeling of Multi-scale DTI and Neuron Tracer Data Hanbo Chen, Yu Zhao, Tuo Zhang, Hongmiao Zhang, Hui Kuang, Meng Li, Joe Z. Tsien, Tianming Liu MICCAI, LNCS, 2014. vol. 8675, pp. 273-280. PDF
21. Group-Wise Optimization of Common Brain Landmarks with Joint Structural and Functional Regulations Dajiang Zhu, Jinglei Lv, Hanbo Chen, Tianming Liu MICCAI, LNCS, 2014. vol. 8674, pp. 716-723. PDF
22. Characterization of U-shape Streamline Fibers: Methods and Applications Tuo Zhang*, Hanbo Chen*, Lei Guo, Kaiming Li, Longchuan Li, Shu Zhang, Dinggang Shen, Xiaoping Hu**, Tianming Liu** Medical Image Analysis, 2014. vol. 18(5), pp. 795-807. *co-first authors; **joint-correspondence authors PDF
23. Identifying and Characterizing Resting State Networks in Temporally Dynamic Functional Connectomes Xin Zhang, Xiang Li, Changfeng Jin, Hanbo Chen, Kaiming Li, Dajiang Zhu, Xi Jiang, Tuo Zhang, Jinglei Lv, Xintao Hu, Junwei Han, Qun Zhao, Lei Guo, Lingjiang Li, Tianming Liu Brain Topography, 2014. vol. 27(6), pp. 747-65. PDF
24. Evolutionarily-preserved consistent gyral folding patterns across primate brains Hanbo Chen, Xiang Yu, Xi Jiang, kaiming li, Longchuan Li, Xintao Hu, Junwei Han, Lei Guo, Xiaoping Hu, Tianming Liu ISBI, 2014. pp. 1218-1221. PDF
25. Group-wise optimization and individualization prediction of structural connectomes Hanbo Chen, kaiming li, Dajiang Zhu, Lei Guo, Tianming Liu ISBI, 2014. pp. 742-745. PDF
26. Characterization of Task-free and Task-performance Brain States via Functional Connectome Patterns Xin Zhang, Lei Guo, Xiang Li, Tuo Zhang, Dajiang Zhu, Kaiming Li, Hanbo Chen, Jinglei Lv, Changfeng Jin, Qun Zhao, Lingjiang Li, Tianming Liu Medical Image Analysis, 2013. vol. 17(8), pp. 1106–1122. Brain Imaging PDF
27. Identifying Functional Networks via Sparse Representation of Whole-brain FMRI Signals Jinglei Lv, Xi Jiang, Xiang Li, Dajiang Zhu, Hanbo Chen, Tuo Zhang, Shu Zhang, Xintao Hu, Junwei Han, Heng Huang, Jing Zhang, Lei Guo, Tianming Liu IEEE EMBS Conference on Neural Engineering, 2013. pp. 778-781. Brain Imaging PDF
28. Sparse Representation of Higher-order Functional Interaction Patterns in Task-based FMRI Data Shu Zhang, Xiang Li, Jinglei Lv, Xi Jiang, Dajiang Zhu, Hanbo Chen, Tuo Zhang, Lei Guo, Tianming Liu MICCAI, LNCS, 2013. vol. 8151, pp. 626-634. Brain Imaging PDF
29. Identifying Group-wise Consistent White Matter Landmarks via Novel Fiber Shape Descriptor Hanbo Chen, Tuo Zhang, Tianming Liu MICCAI, LNCS, 2013. vol. 8149, pp. 66-73. Brain Imaging PDF
30. Inferring Group-wise Consistent Multimodal Brain Networks via Multi-view Spectral Clustering Hanbo Chen, Kaiming Li, Dajiang Zhu, Xi Jiang, Yixuan Yuan, Peili Lv, Tuo Zhang, Lei Guo, Dinggang Shen*, Tianming Liu*, *Joint corresponding authors IEEE Transactions on Medical Imaging, 2013. vol. 32(9), pp. 1576 - 1586. Brain Imaging PDF
31. Exploring High-Order Functional Interactions via Structurally-Weighted LASSO Models Dajiang Zhu, Xiang Li, Xi Jiang, Hanbo Chen, Dinggang Shen, Tianming Liu IPMI, LNCS, 2013. vol. 7917, pp. 13-24. Brain Imaging PDF
32. Identifying Consistent Brain Networks via Maximizing Predictability of Functional Connectome from Structural Connectome Hanbo Chen, Kaiming Li, Dajiang Zhu, Tianming Liu ISBI, 2013. pp. 978-981. Brain Imaging PDF
33. Joint Analysis of Gyral Folding and Fiber Shape Patterns Xiang Yu*, Hanbo Chen*, Tuo Zhang, Xintao Hu, Lei Guo, Tianming Liu, *Joint first authors ISBI, 2013. pp. 85 - 88. Brain Imaging PDF
34. Assessing Regularity and Variability of Cortical Folding Patterns of DICCCOLs Jia Chen, Jianfeng Lu, Hanbo Chen, Dajiang Zhu, Tianming Liu ISBI, 2013. pp. 974-977. Brain Imaging PDF
35. Identifying Functional Connectomics Abnormality in Attention Deficit Hyperactivity Disorder Peng Wang*, Dajiang Zhu*, Hanbo Chen, Xi Jiang, Li Sun, Qingjiu Cao, An Li, Tianming Liu, Yufeng Wang, *Joint first authors ISBI, 2013. pp. 544-547. Brain Imaging PDF
36. Meta-analysis of Functional Roles of DICCCOLs Yixuan Yuan; Xi Jiang; Dajiang Zhu; Hanbo Chen; Kaiming Li; Peili Lv; Xiang Yu; Xiaojin Li; Shu Zhang; Tuo Zhang; Xintao Hu; Junwei Han; Lei Guo, Tianming Liu Neuroinformatics, 2013. vol. 11(1), pp. 47-63. Brain Imaging PDF
37. Coevolution of Gyral Folding and Structural Connection Patterns in Primate Brains Hanbo Chen*, Tuo Zhang*, Lei Guo, Kaiming Li, Xiang Yu, Longchuan Li, Xintao Hu, Junwei Han, Xiaoping Hu**, Tianming Liu**, *Joint first authors, **Joint corresponding authors Cerebral Cortex, 2013. vol. 23(5), pp. 1208-1217. Brain Imaging PDF
38. DICCCOL: Dense Individualized and Common Connectivity-based Cortical Landmarks Dajiang Zhu*, Kaiming Li*, Lei Guo, Xi Jiang, Tuo Zhang, Degang Zhang, Hanbo Chen, Fan Deng, Carlos Faraco, Changfeng Jin, Chong-Yaw Wee, Yixuan Yuan, Peili Lv, Yan Yin, Xiaolei Hu, Lian Duan, Xintao Hu, Junwei Han, Lihong Wang, Dinggang Shen, L Stephen Miller, Lingjiang Li, Tianming Liu, *Joint first authors Cerebral Cortex, 2013. vol. 23(4), pp. 786-800. Brain Imaging PDF
39. Diffusion Tensor Imaging Reveals Evolution of Primate Brain Architectures Degang Zhang, Lei Guo, Dajiang Zhu, Kaiming Li, Longchuan Li, Hanbo Chen, Qun Zhao, Xiaoping Hu**, and Tianming Liu**, **Joint corresponding authors Brain Structure and Function, 2013. vol. 218(6), pp. 1429-1450. Brain Imaging PDF
40. Inferring Group-wise Consistent Multimodal Brain Networks via Multi-view Spectral Clustering Hanbo Chen, Kaiming Li, Dajiang Zhu, Tuo Zhang, Changfeng Jin, Lei Guo, Lingjiang Li, Tianming Liu MICCAI, LNCS, 2012. vol. 7512, pp. 297-304. Brain Imaging PDF
41. Group-wise Consistent Parcellation of Gyri via Adaptive Multi-view Spectral Clustering of Fiber Shapes Hanbo Chen, Xiao Cai, Dajiang Zhu, Feiping Nie, Tianming Liu, Heng Huang MICCAI, LNCS, 2012. vol. 7511, pp. 271-279. Brain Imaging PDF
42. Visual Analytics of Brain Networks Kaiming Li, Lei Guo, Carlos Faraco, Dajiang Zhu, Hanbo Chen, Yixuan Yuan, Jinglei Lv, Fan Deng, Xi Jiang, Tuo Zhang, Xintao Hu, Degang Zhang, Lloyd Miller, Tianming Liu NeuroImage, 2012. vol. 61(1), pp. 82–97. Brain Imaging PDF
43. Axonal Fiber Terminations Concentrate on Gyri Jingxin Nie, Lei Guo, Kaiming Li, Yonghua Wang, Guojun Chen, Longchuan Li, Hanbo Chen, Fan Deng, Xi Jiang, Tuo Zhang, Ling Huang, Carlos Faraco, Degang Zhang, Cong Guo, Pew-Thian Yap, Xintao Hu, Gang Li, Jinglei Lv, Yixuan Yuan, Dajiang Zhu, Junwei Han, Dean Sabatinelli, Qun Zhao, L Stephen Miller, Bingqian Xu, Ping Shen, Simon Platt, Dinggang Shen, Xiaoping Hu, Tianming Liu Cerebral Cortex, 2012. vol. 22(12), pp. 2831-2839. Brain Imaging PDF
44. Optimization of Functional Brain ROIs via Maximization of Consistency of Structural Connectivity Profiles Dajiang Zhu, Kaiming Li, Carlos Faraco, Fan Deng, Degang Zhang, Xi Jiang, Hanbo Chen, Lei Guo, Stephen Miller, Tianming Liu NeuroImage, 2012. vol. 59(2), pp. 1382–1393. Brain Imaging PDF
45. Assessing Regularity and Variability of Cortical Folding Patterns of Working Memory ROIs Hanbo Chen, Lei Guo, Kaiming Li, Xintao Hu, Tianming Liu MICCAI, LNCS, 2011. vol. 6892, pp. 318-326. Brain Imaging PDF
46. Discovering Dense and Consistent Landmarks in the Brain Dajiang Zhu, Kaiming Li, Carlos Faraco, Fan Deng, Degang Zhang, Xi Jiang, Hanbo Chen, Lei Guo, Stephen Miller, Tianming Liu IPMI, LNCS, 2011. vol. 6801, pp. 97-110. Brain Imaging PDF
47. Fine Granularity Parcellation of Gyrus via Fiber Shape and Connectivity Based Features Dajiang Zhu, Kaiming Li, Carlos Faraco, Fan Deng, Degang Zhang, Xi Jiang, Hanbo Chen, Lei Guo, Stephen Miller, Tianming Liu ISBI, 2011. pp. 817-821. Brain Imaging PDF
48. Optimization of Functional Brain ROIs via Maximization of Consistency of Structural Connectivity Profiles Dajiang Zhu, Kaiming Li, Carlos Faraco, Fan Deng, Degang Zhang, Xi Jiang, Hanbo Chen, Lei Guo, Stephen Miller, Tianming Liu ISBI, 2011. pp. 2150-2154. Brain Imaging PDF
49. Individualized ROI Optimization via Maximization of Group-wise Consistency of Structural and Functional Profiles Kaiming Li, Lei Guo, Carlos Faraco, Dajiang Zhu, Fan Deng, Tuo Zhang, Xi Jiang, Degang Zhang, Hanbo Chen, Xintao Hu, L. Stephen Miller, Tianming Liu NIPS, 2010. Brain Imaging PDF
50. Bridging Low-level Features and High-level Semantics via fMRI Brain Imaging for Video Classification Xintao Hu, Fan Deng, Kaiming Li, Tuo Zhang, Hanbo Chen, Xi Jiang, Jinglei Lv, Dajiang Zhu, Li Xie, Carlos, Faraco, Degang Zhang, Arsham Mesbah, Junwei Han, Xian-Sheng Hua, Stephen Miller, Lei Guo, Tianming Liu ACM Multimedia, 2010. pp. 451-460 . Brain Imaging PDF
51. A dynamic skull model for simulation of cerebral cortex folding Hanbo Chen, Lei Guo, Jingxin Nie, Tuo Zhang, Xintao Hu, Tianming Liu MICCAI, LNCS, 2010. vol. 6362, pp. 412-419. Brain Imaging PDF
52. Human-friendly Attention Models for Video Summarization Kaiming Li, Tuo Zhang, Xintao Hu, Dajiang Zhu, Hanbo Chen, Xi Jiang, Fan Deng, Jinglei Lv, Carlos, Faraco, Degang Zhang, Arsham Mesbah, Junwei Han, Lie Lu, Xian-Sheng Hua, Lei Guo, Stephen Miller, Tianming Liu ICMI, 2010. Multimedia PDF